PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON43772.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

FAR1

Protein Properties

Length: 173aa MW: 20187.2 Da PI: 9.5634

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON43772.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	40.7	7.9e-13	47	132	5	89
FAR1 5 eYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +++k++ Fs+r++ k++ + it+r+++ +k+ ++e ++++ t++++ +++ trtgC+a ++v +++ +++w+ +k++ HnHe PON43772.1 47 TFSKRMSFSIRTDDIKQK--GDIITMRRWYAQKKVFEEINSSTclTQNKKPPKPITRTGCQAVFRVIRNRdTDTWRAKKFVRTHNHET 132 6899*****9987776..88899*********9999998999999*********9988887*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 173 aa Download sequence
MMDVDTLSSH NWPSIIEALQ LKNTVETEDI FRKDIESLEK WEPLSSTFSK RMSFSIRTDD 60 IKQKGDIITM RRWYAQKKVF EEINSSTCLT QNKKPPKPIT RTGCQAVFRV IRNRDTDTWR 120 AKKFVRTHNH ETASVQEMQF LCSNYDVPDD VAVQIMSMNK VGIKTFKIVA HVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-08	FAR1 family protein