PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON44030.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB
Protein Properties Length: 302aa    MW: 35268.2 Da    PI: 5.4195
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON44030.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.85.1e-131461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd +l + +   G ++W+ +++  g+ R++k+c++rw +yl
       PON44030.1 14 RGPWTIEEDHKLMNFILNNGIHCWRMVPKLAGLLRCGKSCRLRWINYL 61
                     89******************************99************97 PP
2Myb_DNA-binding54.13.6e-1767110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg +T+ E+ ++++++ +lG++ W++Ia++++ gRt++++k++w++
       PON44030.1  67 RGGFTEVEENQIIQLHSRLGNR-WSKIAAHFP-GRTDNEIKNHWNT 110
                      788*******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MGRQPCCDKV GLKRGPWTIE EDHKLMNFIL NNGIHCWRMV PKLAGLLRCG KSCRLRWINY  60
LRPDLKRGGF TEVEENQIIQ LHSRLGNRWS KIAAHFPGRT DNEIKNHWNT RIKKRLKLLG  120
LDPVTHQPMN DQHKENDTKV VEDQDDQQKT LETTTSAESS VDDHRPKVEE NSLEKAAKPA  180
DDDDQLRELV PETKEERWNI NGVEQVSTEM NYNDVLNINY ETVCQKLDFS TWMEQEMNNN  240
NNNSNNIAYS YSSSLSLEES NNLSSPSLLA DTYVDDSIFS WEGFNYHHHL EQDLFFFQNT  300
QR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14340.17e-88MYB family protein