PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON44210.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GATA
Protein Properties Length: 205aa    MW: 23044.3 Da    PI: 10.1325
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON44210.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.92.4e-17140174135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 Cs+C +  Tp+WR gp g+ktLCnaCG++y++ +l
  PON44210.1 140 CSHCLSQRTPQWRAGPLGPKTLCNACGVRYKSGRL 174
                 *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MDFCWNFSIS PPSSDLNGSS SGLDDLFSSQ NTKPQKKPTS LEAFSVPSKA RRSKRKRALL  60
TKKRDPLTIW SSHQTLQMSM TSDTPLLQQT YWLADSELIV PKNEEEREEK KGSVEEKEPL  120
GELGLMGHVL LQPGPVARRC SHCLSQRTPQ WRAGPLGPKT LCNACGVRYK SGRLLPEYRP  180
AKSPTFVSYL HSNSHKKVME MRNGS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15157RRSKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.14e-36GATA family protein