PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON44357.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

G2-like

Protein Properties

Length: 497aa MW: 54283.8 Da PI: 4.6258

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON44357.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	109.5	1.7e-34	273	327	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav+qLGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+ PON44357.1 273 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 327 79****************************************************8 PP
2	Myb_DNA-binding	56.9	4.7e-18	275	326	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av+qlGg t+k + + m +g+t +++ks++qky+ PON44357.1 275 RMRWTPELHEAFVEAVNQLGGSeraTPKGVLKLMKvEGLTIYHVKSHLQKYR 326 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MSACDIRQTM EARPALSISR SGAKQLTNMG VSGALSSPLP VLPPHFEEAY PKLPDSQQVS 60 MERELMTSPV THASRLPSNS GVMGHIFSSS SGYSSDLHYS SVSPHKNQSR NAPFISQSST 120 SGVSFPVPQS SNSTLLPSTT SGHYAKENSA SWCTDSVSDF LDFPVNTSVE NSQVEGSSCS 180 GIMGPEEFGK RSDWQEWADQ LITDDDALNS NWDELLADTN VTDIEPKMAY QVSKSSSSIQ 240 VQQSQVHQQL SAPSGEIQTI ATPSSSANNT AAKPRMRWTP ELHEAFVEAV NQLGGSERAT 300 PKGVLKLMKV EGLTIYHVKS HLQKYRTARY RPDSSEGSSD KKLTSIDEIS SLDLKTGIEI 360 TEALRLQMEV QKRLHEQLEI QRNLQLRIEE QGRCLQMMFE KQCKSNMDKL KASSSTLENP 420 SVVSSDAVQD SPNELEASES DHGKTGTDQG DAKTTTEEGS DELCEQQEAP QEEAPDDLEP 480 DACGASSQPS KRLRTSE

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MSACDIRQTM EARPALSISR SGAKQLTNMG VSGALSSPLP VLPPHFEEAY PKLPDSQQVS  60
MERELMTSPV THASRLPSNS GVMGHIFSSS SGYSSDLHYS SVSPHKNQSR NAPFISQSST  120
SGVSFPVPQS SNSTLLPSTT SGHYAKENSA SWCTDSVSDF LDFPVNTSVE NSQVEGSSCS  180
GIMGPEEFGK RSDWQEWADQ LITDDDALNS NWDELLADTN VTDIEPKMAY QVSKSSSSIQ  240
VQQSQVHQQL SAPSGEIQTI ATPSSSANNT AAKPRMRWTP ELHEAFVEAV NQLGGSERAT  300
PKGVLKLMKV EGLTIYHVKS HLQKYRTARY RPDSSEGSSD KKLTSIDEIS SLDLKTGIEI  360
TEALRLQMEV QKRLHEQLEI QRNLQLRIEE QGRCLQMMFE KQCKSNMDKL KASSSTLENP  420
SVVSSDAVQD SPNELEASES DHGKTGTDQG DAKTTTEEGS DELCEQQEAP QEEAPDDLEP  480
DACGASSQPS KRLRTSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	7e-95	G2-like family protein