PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON44847.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

YABBY

Protein Properties

Length: 177aa MW: 19725.3 Da PI: 5.6148

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON44847.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	212.2	1.7e-65	6	165	2	168
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssek 100 ++f+ seq+CyvqC+ C+til+vsvP +s+++vvtvrCGhCt llsvn++kas + hl sl ++ ++e+++s +++ ++a++++ss PON44847.1 6 QIFNLSEQICYVQCGLCTTILLVSVPCSSMSMVVTVRCGHCTGLLSVNMMKASFVP---LHLLASLGQNHE-----QKEEVDSEEMEPQNAMETRSSVV 96 7899******************************************99988542...233333333333.....33334444444444444444444 PP YABBY 101 lsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihf 168 s+ ed ++ + v++PPekrqr+Psaynrfi+eei+r+ka+nP+++h+eafsaaaknWahfP+ + PON44847.1 97 SSDTEDGDSISLDQiVNKPPEKRQRAPSAYNRFIREEIKRLKAENPNMAHKEAFSAAAKNWAHFPPTQY 165 4444554544455559***********************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 177 aa Download sequence
MSSLNQIFNL SEQICYVQCG LCTTILLVSV PCSSMSMVVT VRCGHCTGLL SVNMMKASFV 60 PLHLLASLGQ NHEQKEEVDS EEMEPQNAME TRSSVVSSDT EDGDSISLDQ IVNKPPEKRQ 120 RAPSAYNRFI REEIKRLKAE NPNMAHKEAF SAAAKNWAHF PPTQYKGGED QSCNQRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23420.1	1e-59	YABBY family protein