PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON45077.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 559aa MW: 62913 Da PI: 4.6347

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON45077.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.8	2e-13	320	363	7	55
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +ErrRR+++N+++ +Lr+l+Pk + Kl+ a+iL A+eY+k+Lq PON45077.1 320 VAERRRRKKLNERLYTLRSLVPKiS------KLDRASILGDAIEYVKDLQ 363 58*******************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MERLRPLVGL KGWDYCVLWR LSEDQRFIEW MNCCCAGTEN TVQNGGDEEL LFPVSPVLPC 60 RDTMIQHPRA NSCDLLAQLP TSMPLDSGIY AQTLVSNQPS WLNFSTVTCS HVLEESVGTR 120 VLVPLPVALI ELYVNKQISE DQNVIDFITA QCNISIEQEG LINTNNLDTS FSVNVNTMSE 180 TKSRPFLGNE LPYDISVDLT SLYNSSTNMQ QFGYSSENRT ENDAAFFECS HNPSLLSDKQ 240 MDSSVDVLQP SMMTDTANMH MHFMEPITEN KDQQGNEKDS NKQDEGRSNS VSDCSDQIDD 300 EDDGKYRRKS AKGPQCKNLV AERRRRKKLN ERLYTLRSLV PKISKLDRAS ILGDAIEYVK 360 DLQSQAKELQ DELEEHSDND CLKNSGVNVI RNNVSSDILS HSEADFGSKP ENVKAQNEFH 420 LETSGSASIS KQNQDSDTTN DKAPQMEPQV EVAQIDGNEF FVKVFCEHKP GRFVRLMEAL 480 NSLALEVTNA NVTTFRNLVS NVLKVEKKDS KVAVQADHLR DFLLELTRNP SRGLSEMSKA 540 SENGGSIDYQ HHHNQQPTY

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MERLRPLVGL KGWDYCVLWR LSEDQRFIEW MNCCCAGTEN TVQNGGDEEL LFPVSPVLPC  60
RDTMIQHPRA NSCDLLAQLP TSMPLDSGIY AQTLVSNQPS WLNFSTVTCS HVLEESVGTR  120
VLVPLPVALI ELYVNKQISE DQNVIDFITA QCNISIEQEG LINTNNLDTS FSVNVNTMSE  180
TKSRPFLGNE LPYDISVDLT SLYNSSTNMQ QFGYSSENRT ENDAAFFECS HNPSLLSDKQ  240
MDSSVDVLQP SMMTDTANMH MHFMEPITEN KDQQGNEKDS NKQDEGRSNS VSDCSDQIDD  300
EDDGKYRRKS AKGPQCKNLV AERRRRKKLN ERLYTLRSLV PKISKLDRAS ILGDAIEYVK  360
DLQSQAKELQ DELEEHSDND CLKNSGVNVI RNNVSSDILS HSEADFGSKP ENVKAQNEFH  420
LETSGSASIS KQNQDSDTTN DKAPQMEPQV EVAQIDGNEF FVKVFCEHKP GRFVRLMEAL  480
NSLALEVTNA NVTTFRNLVS NVLKVEKKDS KVAVQADHLR DFLLELTRNP SRGLSEMSKA  540
SENGGSIDYQ HHHNQQPTY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	307	328	RRKSAKGPQCKNLVAERRRRKK
2	322	329	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	1e-128	bHLH family protein