PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON45134.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family Trihelix
Protein Properties Length: 379aa    MW: 41649.8 Da    PI: 10.538
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON45134.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix48.32.6e-1572159186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W++  + +Li+a  e+  +l+rg+lk+++W+ev++ +      ++  ++ +qCk++++ ++k+yk +k+  +++  +  s++p++d+l+
  PON45134.1  72 CWSEGATSVLIDAWGERYLELSRGNLKQKHWKEVADIVsgrdDYTKAPKTDIQCKNRIDTVKKKYKLEKAKLSSG--GGPSKWPFYDRLD 159
                 7*************************************85555555666778*********************97..67778******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
MEEDDEIQSH LSPRSGSPVS PRPVGRITVT VAAAPPQQPA PQNALTLALP IQQTRNGGGG  60
GGGVGGGGRE DCWSEGATSV LIDAWGERYL ELSRGNLKQK HWKEVADIVS GRDDYTKAPK  120
TDIQCKNRID TVKKKYKLEK AKLSSGGGPS KWPFYDRLDH LIGPTVKMAS AGGHNTRAVS  180
SQQTPSQQTH KVPLGIPVGV RGSSPYQGHR DQKPHIQQVQ LKNQKMQFKR RGPVDSGSSR  240
EASPASTDSF PMDFYERKRL RIGREMNLNA NSNPGRVGGG TLRAGREKKG WGSAVKELTQ  300
AILKFGEAYE HAESSKLQQV VEMEKQRMKF AKELELQRMQ FFMKTQLEIT QLKHGRRGGI  360
GNASNHHSNN NNNNSDSSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14180.19e-69Trihelix family protein