PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON45291.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

SBP

Protein Properties

Length: 344aa MW: 37911.3 Da PI: 8.9052

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON45291.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.1	1.9e-41	41	117	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC++dls++++yhrrhkvCevhsk+p+v++ g+eqrfCqqCsrfh+l efDeekrsCr+rL++hn+rrrk+q+ PON45291.1 41 CLVDGCNSDLSKCRDYHRRHKVCEVHSKTPKVTIGGREQRFCQQCSRFHSLVEFDEEKRSCRKRLDGHNRRRRKPQP 117 **************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MVDGSKIEWK DLGTLDMESS SSSMPLKRTR AHSNGIQVPS CLVDGCNSDL SKCRDYHRRH 60 KVCEVHSKTP KVTIGGREQR FCQQCSRFHS LVEFDEEKRS CRKRLDGHNR RRRKPQPEPM 120 SIISGRFLSS YQGTRFSPFH SPQAFPSAAM NSALAMAGAA KSESDVVLDK THSQFSVTRE 180 NPFPGSLNHS YTGGKEISFV QSPSCTLPEA SSVSHSFMDS SSSLNNCGNS QRIFSNNWLY 240 RDSVDSNCAL SLLSSTPTDT KEIGLSHMVQ PNSSTSRRAQ SLIQASLHYS GLGMVSEPEV 300 KPALLTDGSV NGSFHCQEMF RIRPEGSSSG GPHHNSPRGN RIPP

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MVDGSKIEWK DLGTLDMESS SSSMPLKRTR AHSNGIQVPS CLVDGCNSDL SKCRDYHRRH  60
KVCEVHSKTP KVTIGGREQR FCQQCSRFHS LVEFDEEKRS CRKRLDGHNR RRRKPQPEPM  120
SIISGRFLSS YQGTRFSPFH SPQAFPSAAM NSALAMAGAA KSESDVVLDK THSQFSVTRE  180
NPFPGSLNHS YTGGKEISFV QSPSCTLPEA SSVSHSFMDS SSSLNNCGNS QRIFSNNWLY  240
RDSVDSNCAL SLLSSTPTDT KEIGLSHMVQ PNSSTSRRAQ SLIQASLHYS GLGMVSEPEV  300
KPALLTDGSV NGSFHCQEMF RIRPEGSSSG GPHHNSPRGN RIPP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	98	115	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	1e-46	SBP family protein