PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON45642.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Protein Properties

Length: 588aa MW: 64766.9 Da PI: 7.8335

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON45642.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	53.1	5.7e-17	34	124	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ffk+++ d +++ l lp kfa e +++ ++ +led+sg++Wev+ +k g+ +++GW++F+ ++gLk+gDfv+F + +s f vvk+++ PON45642.1 34 FFKIMI-GDDFSR-FLFLPPKFAHEVsSLV---GQRTILEDSSGEQWEVTP--SKVNGSLAFQQGWNSFALDHGLKVGDFVLFFHLTESHF--VVKIYD 123 677773.344555.59*****8885444...346899********..999999*********************8877888..**99 PP S CS B3 99 k 99 k PON45642.1 124 K 124 7 PP
2	B3	35.7	1.5e-11	518	573	30	87
..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 30 keesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 + e k + l+d+ r W v + +k + +v+t+GW+ F kang+++gD ++Fk +++ PON45642.1 518 NVERKVVLLQDPAQRLWPVLY--HGKLSLIVITTGWEAFSKANGIQSGDQCLFKIENE 573 34556899***********..999999***********************7654 PP

Sequence ? help Back to Top
Protein Sequence Length: 588 aa Download sequence
MDSKVKACTA CTRMCWMVHR EKKNSTDSHS VSSFFKIMIG DDFSRFLFLP PKFAHEVSSL 60 VGQRTILEDS SGEQWEVTPS KVNGSLAFQQ GWNSFALDHG LKVGDFVLFF HLTESHFVVK 120 IYDKTSCEKL NYPERINHRK RMWDDKSSTG KDGRFGTVDE HSTDKHGSGT SVKFGVAAEN 180 VGCLNEVNDE NSTDRHCSGT SVKSAVAAEK GCLKVNDVVE LPISGTVPKA EDIEEIHCMM 240 DRDPGVKQGD YGRSNFDLSV FEMWNHTSSK RSTRESLADE RSPHQVDSLL RSQNGAALID 300 KEKVAKGVAS GAGPSDSFNC EKKESISHKY SCIAMTSGNP LPSSVVNPKE NGENTSNMSN 360 RGMKVCQVAK GNIQVTPFQK HNANNDNCQT VNKSVKGTMA ASSISTRFGS KKFQSGKMMK 420 VVKEEPMEIE SDPCGQGPIQ KLSGESFKVT NGGLPRRVSF GVRKDDRSLS VVKLENVDLV 480 GGSSTDSPNF SPLLATSSES FIELPEYLPF PSTKGRSNVE RKVVLLQDPA QRLWPVLYHG 540 KLSLIVITTG WEAFSKANGI QSGDQCLFKI ENEFEGIYSV STLESRKK

Sequence ? help Back to Top

Protein Sequence Length: 588 aa Download sequence

MDSKVKACTA CTRMCWMVHR EKKNSTDSHS VSSFFKIMIG DDFSRFLFLP PKFAHEVSSL  60
VGQRTILEDS SGEQWEVTPS KVNGSLAFQQ GWNSFALDHG LKVGDFVLFF HLTESHFVVK  120
IYDKTSCEKL NYPERINHRK RMWDDKSSTG KDGRFGTVDE HSTDKHGSGT SVKFGVAAEN  180
VGCLNEVNDE NSTDRHCSGT SVKSAVAAEK GCLKVNDVVE LPISGTVPKA EDIEEIHCMM  240
DRDPGVKQGD YGRSNFDLSV FEMWNHTSSK RSTRESLADE RSPHQVDSLL RSQNGAALID  300
KEKVAKGVAS GAGPSDSFNC EKKESISHKY SCIAMTSGNP LPSSVVNPKE NGENTSNMSN  360
RGMKVCQVAK GNIQVTPFQK HNANNDNCQT VNKSVKGTMA ASSISTRFGS KKFQSGKMMK  420
VVKEEPMEIE SDPCGQGPIQ KLSGESFKVT NGGLPRRVSF GVRKDDRSLS VVKLENVDLV  480
GGSSTDSPNF SPLLATSSES FIELPEYLPF PSTKGRSNVE RKVVLLQDPA QRLWPVLYHG  540
KLSLIVITTG WEAFSKANGI QSGDQCLFKI ENEFEGIYSV STLESRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01580.1	7e-11	B3 family protein