PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON45741.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

G2-like

Protein Properties

Length: 423aa MW: 47451 Da PI: 6.997

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON45741.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.7	9.6e-32	82	135	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+++AtPk +l+lm++kgL+++hvkSHLQ+YR+ PON45741.1 82 PRLRWTPDLHLCFVRAVERLGGQDRATPKLVLQLMNIKGLSIAHVKSHLQMYRS 135 8****************************************************7 PP
2	Myb_DNA-binding	51.1	3.1e-16	83	134	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg t+k++ + m+ kg++ ++ks++q+y+ PON45741.1 83 RLRWTPDLHLCFVRAVERLGGQdraTPKLVLQLMNiKGLSIAHVKSHLQMYR 134 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MERPSSDDDS SSQLSKTSPS NNKNNIIELN HEDEGEEEEE EEKDSHEQNN CRSSSNSTVE 60 ETVSKKGASS GSVRQYVRSK TPRLRWTPDL HLCFVRAVER LGGQDRATPK LVLQLMNIKG 120 LSIAHVKSHL QMYRSKKIED PNQVLSEQGF FLEGGGEHHH IYNLSPLPML QSFNQWPSSG 180 LRYGDSSWRS GRDHQIYNSP RSIRAALDSA GRSSHGSVHG LNYGSVAERL LYRNNTNNTN 240 SAQITSTTTT TSTSYMNNIP YSNFNSPSWR RHIQAHQNES FQGSWRTPLL IGPISTEDHI 300 TDHHVLPKKF HDEKGTDNHH DDTNLKNTST TIAGASQISI EEGQRNPKRK ANFDSENCDL 360 DLNLSLKVTP KDHGEKGLVG NNEEVEYYNR TSLSLSLSPS SSSKLMDRKH GRLMAASTLD 420 LTL

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MERPSSDDDS SSQLSKTSPS NNKNNIIELN HEDEGEEEEE EEKDSHEQNN CRSSSNSTVE  60
ETVSKKGASS GSVRQYVRSK TPRLRWTPDL HLCFVRAVER LGGQDRATPK LVLQLMNIKG  120
LSIAHVKSHL QMYRSKKIED PNQVLSEQGF FLEGGGEHHH IYNLSPLPML QSFNQWPSSG  180
LRYGDSSWRS GRDHQIYNSP RSIRAALDSA GRSSHGSVHG LNYGSVAERL LYRNNTNNTN  240
SAQITSTTTT TSTSYMNNIP YSNFNSPSWR RHIQAHQNES FQGSWRTPLL IGPISTEDHI  300
TDHHVLPKKF HDEKGTDNHH DDTNLKNTST TIAGASQISI EEGQRNPKRK ANFDSENCDL  360
DLNLSLKVTP KDHGEKGLVG NNEEVEYYNR TSLSLSLSPS SSSKLMDRKH GRLMAASTLD  420
LTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	3e-47	G2-like family protein