PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON45829.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family LBD
Protein Properties Length: 241aa    MW: 26696.4 Da    PI: 4.3825
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON45829.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260126.11.7e-3971081101
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+++C++apyf  ++ +++fa+vhk+FGasnv+kll +lp ++r+da++++ yeA ar+rdP+yG+v++i++lqqq++ l++e++ l+
  PON45829.1   7 SCGACKFLRRKCSSECIFAPYFSYDEaASHFAAVHKVFGASNVSKLLLHLPLHNRSDAATTISYEALARMRDPIYGCVAHIFALQQQVAYLQEEIEILG 105
                 6**********************98868********************************************************************998 PP

      DUF260  99 eel 101
                 +++
  PON45829.1 106 NQI 108
                 875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MTGFGSSCGA CKFLRRKCSS ECIFAPYFSY DEAASHFAAV HKVFGASNVS KLLLHLPLHN  60
RSDAATTISY EALARMRDPI YGCVAHIFAL QQQVAYLQEE IEILGNQIAN NVTAGLASCG  120
SSEATNNNNN NNNSNSLNSG SQLFSEHVVL NSQYYQNQQE VLLSQIQNST GSFSNQVFDE  180
QMGVQLLQPP YGWGDEENVV CNSLSDPLER FFEGIQQENS ANNPWSDERP FVENCIGQIW  240
E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06080.13e-60LBD family protein