PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON45926.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

ARR-B

Protein Properties

Length: 674aa MW: 73211.4 Da PI: 6.7109

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON45926.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.8	5.1e-28	234	287	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av+qL G +kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl PON45926.1 234 KPRVVWSVELHQQFVSAVNQL-GLDKAVPKRILELMNVPGLTRENVASHLQKFRL 287 79*****************.******************************8 PP
2	Myb_DNA-binding	40.5	6.5e-13	236	286	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qk++ PON45926.1 236 RVVWSVELHQQFVSAVNQLGLDkaVPKRILELMNvPGLTRENVASHLQKFR 286 678**********************************************97 PP
3	Response_reg	74	5.7e-25	51	159	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+ + +++++q+l++ +y v+ +++++ al+ll+e++ +D++l D+ mp+mdG++ll++ e +lp+i+++a g + + + ++ Ga PON45926.1 51 VLVVDDDTTCLRIVEQMLRRCHY-LVTICSQATFALKLLRERKgcFDVVLSDVHMPDMDGYKLLEHVGLEM-DLPVIMMSADGRTSAVMKGIRHGAC 145 89*******************.***************************************6644.8******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ +eel + PON45926.1 146 DYLIKPIREEELKN 159 *********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 674 aa Download sequence
MAALQRVAQS SLSTAGNSYA SCKAGLGSST CAGPVVDEKV ASDEFPVGLK VLVVDDDTTC 60 LRIVEQMLRR CHYLVTICSQ ATFALKLLRE RKGCFDVVLS DVHMPDMDGY KLLEHVGLEM 120 DLPVIMMSAD GRTSAVMKGI RHGACDYLIK PIREEELKNI WQHVVRKKWN ENKDFENSGS 180 LEDNDRNKRV NDDTDYASSV NEETEGLKGQ KKRSNNKEED DCELENDDPS TSKKPRVVWS 240 VELHQQFVSA VNQLGLDKAV PKRILELMNV PGLTRENVAS HLQKFRLYLK RLSGGVTQQQ 300 NGISSTFCGS VEANVKLASL GRFDIQALAA SGQIPPQTLA ALHAELLGQP AGNLMPTLDQ 360 PPLLHASMQG PKRATVEHGL AFGQPLVKCQ PNIFKQFPQS ILSVDDASSR YGVWTSNGLG 420 TVGPSNTIGG LNNSNSNLLM DVLQRQQHKQ QPQLQQQSLL PEPSHSINVQ PSCLVVPSQS 480 SASFQAGSPV SVNQNSNFNR NSVIDYSILS PQSNNSALSV GHISNGDMKT SGILCGYSAP 540 SSSSTMSSGS LNADNSPSQQ NSAVTNGDAR QLPRLVPNIA DIQGSYGAKS GEMLDQGPLR 600 NLGFVGKGTC IPSRFAVDEF ESPMNNFNHG NVHSENHVNP VKQEPSMDFT NNAKVGVPVL 660 RQFPSNDLMS VFTK

Sequence ? help Back to Top

Protein Sequence Length: 674 aa Download sequence

MAALQRVAQS SLSTAGNSYA SCKAGLGSST CAGPVVDEKV ASDEFPVGLK VLVVDDDTTC  60
LRIVEQMLRR CHYLVTICSQ ATFALKLLRE RKGCFDVVLS DVHMPDMDGY KLLEHVGLEM  120
DLPVIMMSAD GRTSAVMKGI RHGACDYLIK PIREEELKNI WQHVVRKKWN ENKDFENSGS  180
LEDNDRNKRV NDDTDYASSV NEETEGLKGQ KKRSNNKEED DCELENDDPS TSKKPRVVWS  240
VELHQQFVSA VNQLGLDKAV PKRILELMNV PGLTRENVAS HLQKFRLYLK RLSGGVTQQQ  300
NGISSTFCGS VEANVKLASL GRFDIQALAA SGQIPPQTLA ALHAELLGQP AGNLMPTLDQ  360
PPLLHASMQG PKRATVEHGL AFGQPLVKCQ PNIFKQFPQS ILSVDDASSR YGVWTSNGLG  420
TVGPSNTIGG LNNSNSNLLM DVLQRQQHKQ QPQLQQQSLL PEPSHSINVQ PSCLVVPSQS  480
SASFQAGSPV SVNQNSNFNR NSVIDYSILS PQSNNSALSV GHISNGDMKT SGILCGYSAP  540
SSSSTMSSGS LNADNSPSQQ NSAVTNGDAR QLPRLVPNIA DIQGSYGAKS GEMLDQGPLR  600
NLGFVGKGTC IPSRFAVDEF ESPMNNFNHG NVHSENHVNP VKQEPSMDFT NNAKVGVPVL  660
RQFPSNDLMS VFTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-121	ARR-B family protein