PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON46034.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

NF-YB

Protein Properties

Length: 215aa MW: 21664.9 Da PI: 6.6272

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON46034.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	185.8	3.4e-58	23	118	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 reqdr+lPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yv+plk+yl+kyre+egek PON46034.1 23 REQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVDPLKIYLQKYREMEGEK 118 89********************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MADSDNESGG GHNHAHSGEL SAREQDRLLP IANVSRIMKK ALPANAKISK DAKETVQECV 60 SEFISFITGE ASDKCQREKR KTINGDDLLW AMTTLGFEEY VDPLKIYLQK YREMEGEKTT 120 SSLGRPGEKD AGGGSGGGGG AAAGGGGSGG GVSSGGYNGV GGGMYGGGMM MMGTGNHQGH 180 MYGSGGFHHV VGIGEGGGGG GGSCGSGAVG AVKSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	1e-75	NF-YB family protein