PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON46212.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

TCP

Protein Properties

Length: 401aa MW: 44651 Da PI: 7.3469

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON46212.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	109	7.3e-34	54	205	3	135
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..................ssssasec......eaes 77 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl++ak +i+el+ + s + ++ PON46212.1 54 GGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLplppsgnfslltprpeanS------SttapqsND-- 144 78*************************************************************5555555555553332221......111111122.. PP TCP 78 ssssasnsssg............kaaksaakskksqksaasalnlak.esrakarararertrekmriknk 135 + + ++++ + ++ s++++++ ++ +ak+++ ar++t+++ + +++ PON46212.1 145 ----------QegfktnsesnidQWQSASRLPGSNFWSSSTNSSSDAlWRSAKSKEVARDQTANDEKENWR 205 ..........1223333233452333333356666666665566666677799999999999998887775 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MIKNLKDGSD FPPREEANSN DAKVTKASSS TTTSSTTWLR LKDPRIVRVS RVFGGKDRHS 60 KVCTIRGLRD RRVRLSVSTA IQLYDLQDRL GLNQPSKVVD WLLNAAKDEI DELPPLPLPP 120 SGNFSLLTPR PEANSSTTAP QSNDQEGFKT NSESNIDQWQ SASRLPGSNF WSSSTNSSSD 180 ALWRSAKSKE VARDQTANDE KENWRSSRIN EVEEEEPNDH EGSNNLLQRS QNVNHTFFPG 240 VINNAIPNGA TYRWEPQNYP LSFLGGSSHG FTPQTDQLQY LKPSTLSLSS TGSQFLVCPP 300 AGITTTTQTY FPSTAASQHV EIDHHPRQVN HCRQMLISNN PQINLFPNSL QPSSSTTQSM 360 RVPFHFGTTM SSSSSKIVHF SPNDTSGRQQ NKEQQDQFSS E

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MIKNLKDGSD FPPREEANSN DAKVTKASSS TTTSSTTWLR LKDPRIVRVS RVFGGKDRHS  60
KVCTIRGLRD RRVRLSVSTA IQLYDLQDRL GLNQPSKVVD WLLNAAKDEI DELPPLPLPP  120
SGNFSLLTPR PEANSSTTAP QSNDQEGFKT NSESNIDQWQ SASRLPGSNF WSSSTNSSSD  180
ALWRSAKSKE VARDQTANDE KENWRSSRIN EVEEEEPNDH EGSNNLLQRS QNVNHTFFPG  240
VINNAIPNGA TYRWEPQNYP LSFLGGSSHG FTPQTDQLQY LKPSTLSLSS TGSQFLVCPP  300
AGITTTTQTY FPSTAASQHV EIDHHPRQVN HCRQMLISNN PQINLFPNSL QPSSSTTQSM  360
RVPFHFGTTM SSSSSKIVHF SPNDTSGRQQ NKEQQDQFSS E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.1	2e-40	TCP family protein