PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON46421.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 559aa MW: 61277.9 Da PI: 8.3084

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON46421.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	55.8	8.1e-18	266	315	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lrel+P++ ++K +Ka+ L +++eYI+ Lq PON46421.1 266 RSKHSATEQRRRSKINDRFQMLRELIPHS----DQKRDKASFLLEVIEYIQFLQ 315 889***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MELSQPRPYG TKGRKPTHDF LSLYSHSTAQ QDPRPPSQGS YLKTHDFLQP LEQVEKTCAK 60 EETPVEISTA EKPPPPAPPP VEHVLPGGIG TYSISHISYF NQIQRVPKPE GMVFSVAQAS 120 STDRNDENSN CSSYTGSGFT LWEEPAVKKG KTGKENMGDK SGVLEPAARV GQWASSERPS 180 QSSSNNHRGS FSSLSSSQPS GQRNQSFMEM IKSAKFSSHE EELEEEDQFV LKKEASTATI 240 TTTPQRGELR VKVDGKSSDQ KANTPRSKHS ATEQRRRSKI NDRFQMLREL IPHSDQKRDK 300 ASFLLEVIEY IQFLQEKVQK YEGSYQGWNN EPTKLIPWRN NHRVGESFDH SQGLNGASGP 360 PLVFATKFDE KNIAVSPTVP GNAQNLVEFD TNAATITNKG MTFPMSLQSN FFSPVRNGGA 420 LSQAPPRLRS DVENSSSRPQ SQLCQTRSCT TVDGAIASDK LKEEEITVEG GTISISTAYS 480 QGLLNTLTQA LQSSGVDLSQ ASISVQIELG KRASGLTAAA SSITKDNEIL SNNQGVKHSR 540 VATGDDRDQA QKKLKTGKN

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MELSQPRPYG TKGRKPTHDF LSLYSHSTAQ QDPRPPSQGS YLKTHDFLQP LEQVEKTCAK  60
EETPVEISTA EKPPPPAPPP VEHVLPGGIG TYSISHISYF NQIQRVPKPE GMVFSVAQAS  120
STDRNDENSN CSSYTGSGFT LWEEPAVKKG KTGKENMGDK SGVLEPAARV GQWASSERPS  180
QSSSNNHRGS FSSLSSSQPS GQRNQSFMEM IKSAKFSSHE EELEEEDQFV LKKEASTATI  240
TTTPQRGELR VKVDGKSSDQ KANTPRSKHS ATEQRRRSKI NDRFQMLREL IPHSDQKRDK  300
ASFLLEVIEY IQFLQEKVQK YEGSYQGWNN EPTKLIPWRN NHRVGESFDH SQGLNGASGP  360
PLVFATKFDE KNIAVSPTVP GNAQNLVEFD TNAATITNKG MTFPMSLQSN FFSPVRNGGA  420
LSQAPPRLRS DVENSSSRPQ SQLCQTRSCT TVDGAIASDK LKEEEITVEG GTISISTAYS  480
QGLLNTLTQA LQSSGVDLSQ ASISVQIELG KRASGLTAAA SSITKDNEIL SNNQGVKHSR  540
VATGDDRDQA QKKLKTGKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	1e-130	bHLH family protein