PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON46441.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MIKC_MADS
Protein Properties Length: 246aa    MW: 28309.1 Da    PI: 9.2832
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON46441.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF953.2e-30959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krienk+nrqvtfskRr g+lKKA+E+SvLCda+va+i+fs++gkl eys+
  PON46441.1  9 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDADVALIVFSTKGKLAEYST 59
                79***********************************************96 PP
2K-box103.72.3e-348617412100
       K-box  12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                 + + s++ e+akLk++++ Lqr+q+h++Ge+L+sL+lkeLq+LeqqL+++lk++R++Kn++++e+i+elqkk k+lqe+n+ L+kk++e
  PON46441.1  86 EPTGSWSLEHAKLKARVDVLQRNQKHFMGEELDSLTLKELQSLEQQLDSALKHVRTRKNQVMYESISELQKKDKALQEQNNLLSKKIKE 174
                 55789*********************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MGRGRVELKR IENKINRQVT FSKRRSGLLK KAHEISVLCD ADVALIVFST KGKLAEYSTN  60
SSMLRILERY ERYSYAERQL LSDDLEPTGS WSLEHAKLKA RVDVLQRNQK HFMGEELDSL  120
TLKELQSLEQ QLDSALKHVR TRKNQVMYES ISELQKKDKA LQEQNNLLSK KIKEKEKDLA  180
RQALLNQQQS NDADSSSVLQ PQPMQVVDIG VPPRGENGEE KEVEEAQHQN RGNSQLLPWM  240
LNNLNT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.12e-94MIKC_MADS family protein