PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON46770.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 569aa MW: 63058.7 Da PI: 5.6877

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON46770.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.7	3.2e-30	280	338	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ PON46770.1 280 NDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 338 8*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MGREREKEIN MEIDLSLKID AKEEEEEELL EEKEEEEEES KEEKEDDDHD DKKLMIKAVD 60 HDQDQPTIAH VQNNKEAGHG EVEDEASVVE SLQENMKSDE LSTLQMKMNR MKEENNVLRK 120 VVEQTMKDYY DLQIKFAAVH QNNNKKDTLA FLSLHDIQQP KSTTVSKISD GENYNRKSPS 180 PPSTHESTVG RLGESHELGL SLRLQTGTEK LQERDHEEQK HKEEENKEDL TSYNTLVMQN 240 KLQRTDHQLA GITSHVSSAT PPNRKARVSV RARCEAATLN DGCQWRKYGQ KIAKGNPCPR 300 AYYRCTVAPG CPVRKQVQRC LEDMSILITT YEGTHNHPLP VGATAMASTA SAAAASFMLL 360 DSSNPYSDHG STSNFTQGTL HNYSTISPQM LINPMSHYSS SIRTINPNDP SKGIVLDLTN 420 NTPQFPLPNS SSLLSSSHHR PISNNFSWNV PSKLPTYTTS GANNSVTSGL LAASTTGLDE 480 RVWRGEEKTS MAENVTAIAS DPKFRVAVAA AITSLISKDS HITSTNRVGS SASTLDHPKD 540 GESSGNGSSS NNWVLETLST NGKAIRQTP

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MGREREKEIN MEIDLSLKID AKEEEEEELL EEKEEEEEES KEEKEDDDHD DKKLMIKAVD  60
HDQDQPTIAH VQNNKEAGHG EVEDEASVVE SLQENMKSDE LSTLQMKMNR MKEENNVLRK  120
VVEQTMKDYY DLQIKFAAVH QNNNKKDTLA FLSLHDIQQP KSTTVSKISD GENYNRKSPS  180
PPSTHESTVG RLGESHELGL SLRLQTGTEK LQERDHEEQK HKEEENKEDL TSYNTLVMQN  240
KLQRTDHQLA GITSHVSSAT PPNRKARVSV RARCEAATLN DGCQWRKYGQ KIAKGNPCPR  300
AYYRCTVAPG CPVRKQVQRC LEDMSILITT YEGTHNHPLP VGATAMASTA SAAAASFMLL  360
DSSNPYSDHG STSNFTQGTL HNYSTISPQM LINPMSHYSS SIRTINPNDP SKGIVLDLTN  420
NTPQFPLPNS SSLLSSSHHR PISNNFSWNV PSKLPTYTTS GANNSVTSGL LAASTTGLDE  480
RVWRGEEKTS MAENVTAIAS DPKFRVAVAA AITSLISKDS HITSTNRVGS SASTLDHPKD  540
GESSGNGSSS NNWVLETLST NGKAIRQTP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	2e-67	WRKY family protein