PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON46801.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 608aa MW: 67997.7 Da PI: 7.1456

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON46801.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.6	4.6e-13	411	455	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + Er+RR+++N++f+ Lr+llP+ +K +Ka++L ++eY++sL PON46801.1 411 HMISERKRREKLNESFQSLRSLLPPG-----TKKDKASVLNTTTEYLNSL 455 8899******************97.....8*************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 608 aa Download sequence
MDAAFNLDDN YRANFLRVLM QSLGCTYISI WKYNPSNYFL FFLDGLYHED SNTKLPTSSS 60 GSLARRLFEK YSQSVILGLA ENDQVPGLAF RNSTPYLELQ ELDLRRLASN DTQMQFYQTA 120 VFMGCKIGEI ELGLSNVPQM NMKMELRSWF PEVFPSQTQL GIDQDNIIPS QTQLAEQINP 180 IRPPTDNQKP LAASSSSSSL RSLSMDNSPE YSSLLFNINN PTTTTTTTTP NTTSPHNIIN 240 ISQAELQIDP NNIPLLMQPL LPSDEPLMIL PHQQAMQAFA RLRNVQFPTP ETEDAAMTKA 300 ILAVLTSPLA YPASSSSSAY SADHPHHHLI NPKSSAFKNY DSTSSTSTTP SASCLDRHRL 360 SLKKSLFKRS VSFFRSLNLM RNRQRLHAAA TAAAAASATT HRPTTSTQLH HMISERKRRE 420 KLNESFQSLR SLLPPGTKKD KASVLNTTTE YLNSLKAQVE ELSRRNKQLE AQVLSQAPAG 480 IRLTEANKYG HLIIDSSSTS DHQRVDVRIR HVSESTSEEA EVIDLQVILR AAIPVDDLVL 540 RILEFLKTDE NVSLMSMNAN THLTESSSTS LNRVTLRLRV EGSEWDESAF QEAVRRVVAD 600 LAQLKSNH

Sequence ? help Back to Top

Protein Sequence Length: 608 aa Download sequence

MDAAFNLDDN YRANFLRVLM QSLGCTYISI WKYNPSNYFL FFLDGLYHED SNTKLPTSSS  60
GSLARRLFEK YSQSVILGLA ENDQVPGLAF RNSTPYLELQ ELDLRRLASN DTQMQFYQTA  120
VFMGCKIGEI ELGLSNVPQM NMKMELRSWF PEVFPSQTQL GIDQDNIIPS QTQLAEQINP  180
IRPPTDNQKP LAASSSSSSL RSLSMDNSPE YSSLLFNINN PTTTTTTTTP NTTSPHNIIN  240
ISQAELQIDP NNIPLLMQPL LPSDEPLMIL PHQQAMQAFA RLRNVQFPTP ETEDAAMTKA  300
ILAVLTSPLA YPASSSSSAY SADHPHHHLI NPKSSAFKNY DSTSSTSTTP SASCLDRHRL  360
SLKKSLFKRS VSFFRSLNLM RNRQRLHAAA TAAAAASATT HRPTTSTQLH HMISERKRRE  420
KLNESFQSLR SLLPPGTKKD KASVLNTTTE YLNSLKAQVE ELSRRNKQLE AQVLSQAPAG  480
IRLTEANKYG HLIIDSSSTS DHQRVDVRIR HVSESTSEEA EVIDLQVILR AAIPVDDLVL  540
RILEFLKTDE NVSLMSMNAN THLTESSSTS LNRVTLRLRV EGSEWDESAF QEAVRRVVAD  600
LAQLKSNH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	415	420	ERKRRE
2	416	421	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	1e-72	bHLH family protein