PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON47071.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family NF-YA
Protein Properties Length: 340aa    MW: 37546 Da    PI: 8.4814
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON47071.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA99.34e-31187243158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 dep+YVNaKQy++Il+RR  Rakle+++kl  k rkpylheSRh hAl+R+RgsgGrF
  PON47071.1 187 DEPIYVNAKQYRAILRRRRFRAKLEAQNKL-LKVRKPYLHESRHLHALKRARGSGGRF 243
                 79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MQNLLKKDSS VSSIQSESQL FVGCSSWENS SESHAQQSSI SQSLSLNMGV PAQHHQNTKQ  60
LILQFQDQDS SSTQSTGQSH PEVASMKGSN LYGPGMISTL QGYNETQGKS MGGHIKQVSS  120
MGTQDFVFSS QLNHSQPMAH IPFNFAEPYY GGLLAAAAYG PPAMIHHSQM VGMVPARVPL  180
PLDLTEDEPI YVNAKQYRAI LRRRRFRAKL EAQNKLLKVR KPYLHESRHL HALKRARGSG  240
GRFLNRKDVE ESNCGPAERG PDSLASARPH LNKNMMESEV HQPENYKDGS CTTSCSEVTS  300
ASNSDDIFQQ QELRFSVYPM HAHIVGLCAG GNQHHTSALR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.18e-49NF-YA family protein