PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON47286.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family YABBY
Protein Properties Length: 218aa    MW: 24360.8 Da    PI: 8.2545
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON47286.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY229.11.2e-70131782170
       YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkv.vtvrCGhCtsllsvnlakasqllaaeshldeslkee..lleelkveeenlksnvekeesastsvs 97 
                 ++ s s+q+Cyv+CnfC+t+lavsvPs+slfk+ vtvrCGhC++llsvn++      + + h+++++  +  lle+ ++  +n+ +  +++ +++  v 
  PON47286.1  13 HHLSPSDQLCYVHCNFCDTVLAVSVPSESLFKInVTVRCGHCSNLLSVNMRGLL-FPPNQLHFGHAFFTSqhLLEDIRSPPSNMLV--INQPNPNDFV- 107
                 68899***************************989************9988765.5677788899876542277888877776654..4444444333. PP

       YABBY  98 seklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                 + +  + ++ee+p++p v+rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP+ih gl
  PON47286.1 108 MPM--RGRTEEIPKPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHLGL 178
                 323..67999****999*****************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MSASSAAAFS PDHHLSPSDQ LCYVHCNFCD TVLAVSVPSE SLFKINVTVR CGHCSNLLSV  60
NMRGLLFPPN QLHFGHAFFT SQHLLEDIRS PPSNMLVINQ PNPNDFVMPM RGRTEEIPKP  120
PVVNRPPEKR QRVPSAYNRF IKDEIQRIKA GNPDISHREA FSAAAKNWAH FPHIHLGLMP  180
DQPVKKPNIR QQEADDTIMK DGFFSTTNPA ANVGVSPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.17e-87YABBY family protein