PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON47354.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 354aa    MW: 39560.5 Da    PI: 7.1837
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON47354.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.93.8e-13145196155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +r++h  +Er+RR+++N+ ++ Lr+++P++   + ++ + a+i   A++++k+L+
  PON47354.1 145 QRMTHIVVERNRRKQMNDYLAVLRSMMPSS---YVQRGDQASIIGGAINFVKELE 196
                 79****************************...9******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MALETEFFQQ DPFGYNINGR NKDFHGLVGG GGPWSYGYVF PENDMNMHSE VLANDNKLVG  60
QGFNNLAMDL ESIASPSSMV QGLTDQDATN FSPAENFTGN YNLNANGGPF ANRVLSPPET  120
PAATTVRRKR RRIKSIKNKE EVENQRMTHI VVERNRRKQM NDYLAVLRSM MPSSYVQRGD  180
QASIIGGAIN FVKELEQLLQ LLEAKKRTKQ QSSSSSSDSK YSSSPFSDFF IFPQYSTYSS  240
QYGATGDDNK KVSTVIETKS TAEKRSAVAD VEVTMVDSHA NIKVLLKRHQ NQLLKMVVGL  300
QFLRLVVLHL NVTTVDSMVL YSFSVKVEDD SQLTSVNEIA TSVYEMVGRI QNES
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1128132RKRRR
2129133KRRRI
3146157RMTHIVVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.12e-56bHLH family protein