PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON47384.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C2H2
Protein Properties Length: 126aa    MW: 14515.9 Da    PI: 10.4209
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON47384.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2110.001495111521
                 TTTEEESSHHHHHHHHH CS
     zf-C2H2   5 dCgksFsrksnLkrHir 21 
                 +Cg  F++k +Lk Hi+
  PON47384.1  95 ICGSDFKHKRSLKDHIK 111
                 8**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MWGHGSEYRR GPESLKGSQP RVMLGIPCYC CAEGCKNNKE HPRAKPLKDF RTLQTHYKRK  60
HGIKPFMCRK CGKLLAVKGD WRTHEKNCGK RWLCICGSDF KHKRSLKDHI KAFGSDHSPF  120
PPTSSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34790.12e-77C2H2 family protein