PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON47665.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 360aa MW: 40372.6 Da PI: 6.4428

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON47665.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.9	2.7e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv+ ++++G g+W++ +r g++R++k+c++rw +yl PON47665.1 14 KGPWTPEEDQKLVKFIQKHGHGSWRALPRLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	55.1	1.8e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++l PON47665.1 67 RGKFSHEEEETILNLHSILGNK-WSAIASHLP-GRTDNEIKNFWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MGRSPCCDEG GLKKGPWTPE EDQKLVKFIQ KHGHGSWRAL PRLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF SHEEEETILN LHSILGNKWS AIASHLPGRT DNEIKNFWNT HLKKKLIQMG 120 IDPMTHRPRT DIFSSLPHLI ALANLKELMD HPWEEHAVRI QAEAVQNMAK LQYLQYLLQP 180 PANLNSIHGN QTNNLNNLTT SDMETINVLN SLSSFKDNPA FDSPQFQSLT LQSVDGSIPF 240 AHLPDLKIPC SNRDERPVVL NKQTAVNDND QLQDYAVFNN NQLGQDEIIF SAGLSPWQLP 300 PSECTTPSPP SMGAPVAAPE TSVSNLQADA CNIINSSYGE VAHSVWPYLI LDDTLFQDMA

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MGRSPCCDEG GLKKGPWTPE EDQKLVKFIQ KHGHGSWRAL PRLAGLNRCG KSCRLRWTNY  60
LRPDIKRGKF SHEEEETILN LHSILGNKWS AIASHLPGRT DNEIKNFWNT HLKKKLIQMG  120
IDPMTHRPRT DIFSSLPHLI ALANLKELMD HPWEEHAVRI QAEAVQNMAK LQYLQYLLQP  180
PANLNSIHGN QTNNLNNLTT SDMETINVLN SLSSFKDNPA FDSPQFQSLT LQSVDGSIPF  240
AHLPDLKIPC SNRDERPVVL NKQTAVNDND QLQDYAVFNN NQLGQDEIIF SAGLSPWQLP  300
PSECTTPSPP SMGAPVAAPE TSVSNLQADA CNIINSSYGE VAHSVWPYLI LDDTLFQDMA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	1e-100	MYB family protein