PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON47734.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB

Protein Properties

Length: 241aa MW: 27525.8 Da PI: 8.9443

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON47734.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.8	3.9e-11	19	66	2	47
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 +rWT eEd+l+ +a ++ + +W++Ia +++ g++ +++ ++q++ PON47734.1 19 NRWTREEDKLFEQALVEFSDDlphRWDRIAGKIP-GKSIPDVVRHYQDL 66 69***************99*********.**********86 PP
2	Myb_DNA-binding	48.9	1.5e-15	118	162	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E++l++++ kq+G+g+W++I+r + +Rt+ q+ s+ qky PON47734.1 118 PWTEQEHKLFLQGLKQYGKGDWRSISRNVVITRTPTQVASHAQKY 162 8***************************99**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MFHEDPRWTG STQQPAIPNR WTREEDKLFE QALVEFSDDL PHRWDRIAGK IPGKSIPDVV 60 RHYQDLVHDV MVIDSGEVEL PSYADDSAVG LSRWDSANQI SFGSKPKSAE PERKKGTPWT 120 EQEHKLFLQG LKQYGKGDWR SISRNVVITR TPTQVASHAQ KYYLRQGSGK KERKRSSIHD 180 ITSVDSISVP VTPDQKCIPP PHVNPSQQMP TFQQLNSQQI HMNMNTNHGG PFGYQNFGFH 240 K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	5e-71	MYB family protein