PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON48274.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

HSF

Protein Properties

Length: 513aa MW: 55513.9 Da PI: 4.4893

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON48274.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.9	1e-35	46	137	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d++++ ++sws ++nsfvv+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll++i+ PON48274.1 46 FLSKTYDMVDDPATDPIVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLRSIN 133 9******************999*************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k PON48274.1 134 RRKP 137 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MDGVTNGGEA PSSGGAVAGG GAAQPAAPAP APAPAPIPNA NAPPPFLSKT YDMVDDPATD 60 PIVSWSPTNN SFVVWNPPEF ARDLLPKYFK HNNFSSFVRQ LNTYGFRKVD PDRWEFANEG 120 FLRGQKHLLR SINRRKPAHG QNQQQPQPSH AQSSVGACVE VGKFGLEEEV ERLKRDKNVL 180 MQELVRLRQQ QQSTDNQLQT MVQRLQGMEQ RQQQMMSFLA KAVQSPGFLA QFVQQQNESN 240 RRITEANKKR RLRQEGIDES ELSAASDGQI VKYQPPMNEA AKAMLRQIMK ADASSGMDSF 300 KNNPDGFLIG DGSSSSIAID SRSSSSRVSG VMLHEVLPTS GQTSSVPVSS GIPAAAISEI 360 QSSLQPLISE KDTTTPFPDI SVLVGAQDAP SLPISQGDVV MPELSQIPEM VPGDNILGTE 420 TSDGFLDPTS FGVNGSMSID LEDIAPDPEI DALLESATFW DDLLVQSPMA EESSPDGTSN 480 GIEAQPKENG WDKKHMDKLT EQMGLLTSDA QGV

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MDGVTNGGEA PSSGGAVAGG GAAQPAAPAP APAPAPIPNA NAPPPFLSKT YDMVDDPATD  60
PIVSWSPTNN SFVVWNPPEF ARDLLPKYFK HNNFSSFVRQ LNTYGFRKVD PDRWEFANEG  120
FLRGQKHLLR SINRRKPAHG QNQQQPQPSH AQSSVGACVE VGKFGLEEEV ERLKRDKNVL  180
MQELVRLRQQ QQSTDNQLQT MVQRLQGMEQ RQQQMMSFLA KAVQSPGFLA QFVQQQNESN  240
RRITEANKKR RLRQEGIDES ELSAASDGQI VKYQPPMNEA AKAMLRQIMK ADASSGMDSF  300
KNNPDGFLIG DGSSSSIAID SRSSSSRVSG VMLHEVLPTS GQTSSVPVSS GIPAAAISEI  360
QSSLQPLISE KDTTTPFPDI SVLVGAQDAP SLPISQGDVV MPELSQIPEM VPGDNILGTE  420
TSDGFLDPTS FGVNGSMSID LEDIAPDPEI DALLESATFW DDLLVQSPMA EESSPDGTSN  480
GIEAQPKENG WDKKHMDKLT EQMGLLTSDA QGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-123	HSF family protein