PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON48358.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family LBD
Protein Properties Length: 217aa    MW: 23412.5 Da    PI: 9.0534
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON48358.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260128.14.1e-40241241100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+k+C++apyf +eq +++fa+vhk+FGasn +kll +lp+++r da+ sl+yeA ar+rdPvyG+v++i++lq+q+ +l+aela+++
  PON48358.1  24 PCGACKFLRRKCVKGCIFAPYFDSEQgTAHFAAVHKVFGASNASKLLLRLPPHKRLDAVVSLCYEALARIRDPVYGCVAHIFTLQHQVVNLQAELAYVQ 122
                 7***********************9989*********************************************************************99 PP

      DUF260  99 ee 100
                 ++
  PON48358.1 123 AR 124
                 76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MNINGGSSSG SSGTGGGGGG SGGPCGACKF LRRKCVKGCI FAPYFDSEQG TAHFAAVHKV  60
FGASNASKLL LRLPPHKRLD AVVSLCYEAL ARIRDPVYGC VAHIFTLQHQ VVNLQAELAY  120
VQARLSTLQR LPPALPQSQS PSLTTNHILQ SSSNVISASN SSMHLDPLLH HHQQASTELT  180
SFYTNPIDDQ PIHDQDLHEL RRQLVSRGLR VRSSTSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45410.18e-53LBD family protein