PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON48526.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 259aa    MW: 28808.5 Da    PI: 6.6792
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON48526.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.11.8e-09100146554
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 +  rE+ RRdr+N++f eL   + +    + +K +Ka+iL  Av+ + +L
  PON48526.1 100 KACREKLRRDRLNDRFLELVAAMEPG---RLPKTDKAAILSDAVRILTQL 146
                 5689*********************8...89**************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MNVASSENTN WLYDYGLMED VGVPGGEFPV TGTGFIWPLQ PLNASPDASV CSHGDSDSLK  60
EVGSMKRVEV DCSSGDSDNV KEVGSRKRQR SESSGASCSK ACREKLRRDR LNDRFLELVA  120
AMEPGRLPKT DKAAILSDAV RILTQLRSES RLLKETIDDL QERIKELKAE KNELRDERQR  180
LKEDKDRLEQ QVRAAMTSQT SFLPHSPAIP TAALAAQGQL ARNKLMPFSS YPSGVTMWQL  240
MPHTTLDTSQ DHVLRPHVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-87bHLH family protein