PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON48597.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WRKY
Protein Properties Length: 358aa    MW: 40235.9 Da    PI: 5.0461
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON48597.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY72.27e-23141201259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dg +WrKYGqKe+ ++++pr+Y+rCt +   gC+++++v++ +++pk+ ++tY g+H+++
  PON48597.1 141 EDGQAWRKYGQKEILNAQYPRAYFRCTRKydqGCRATRQVQQIQDNPKLYQTTYIGDHTCN 201
                 89*************************998899**************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MGTFIWPENL SKRLIKELVQ GRDMATQLQI LLHKPFGEHG SVSAEELTGK ILNSFTEILS  60
VVMGYNSSVN STSNGNISDQ FSGGGDQVSR VNPIEEASHC DDRNSEDSGE SKKRSLFKDR  120
RGCYKRRNNS QSRTTVLPTI EDGQAWRKYG QKEILNAQYP RAYFRCTRKY DQGCRATRQV  180
QQIQDNPKLY QTTYIGDHTC NIMVKAPQMI KDSDTWKCAS NFKVITSDSS RIIPNTSSKA  240
PTILMEQGEV VKEETPISDS LSDSLSLGNT EDLWPPELKD LELSEPSMGL LMSQKIMGSD  300
HNGHDQDVVS IMFSFDHQDR TCTSASTTSH GLDMEVFVDK SIDFGNCDFE FAETEFTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-47WRKY family protein