PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON48694.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 327aa    MW: 36474.6 Da    PI: 7.1397
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON48694.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.34.1e-16155199655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  ++Er+RR+++N+ f  L  llP++     kK++K++iLe+A++YIk+Lq
  PON48694.1 155 VIAERKRRENLNQLFMALSALLPSL-----KKMDKSSILEEAIKYIKQLQ 199
                 589**********************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MDMTSSMWLS GPEVKDLILT DEYEVSSEFM TAAFLNEGLH HIFTSKSDSS SPFFTATNYS  60
GTSCVSGILE KPNHSSSSTR SMLYHECSSF APSFSNTVPK SFCQFNGNSI GAKNQDCNAG  120
HFSCTNEEDR TTVGQVAKKR ANNITKPATQ LRDNVIAERK RRENLNQLFM ALSALLPSLK  180
KMDKSSILEE AIKYIKQLQE EEKKLIEVQS RDRVTESLAI MKKAEIFEVG DEISANTMED  240
SLLKIEAKMS GKHVLLRIHC QKQKGALAKA LTEVEKLNLT VINSSALPFG NMTLDITIVA  300
QVEKQCDFVV KDLVRSLRSA YFQQLIT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1158163ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-41bHLH family protein