PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON48704.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 347aa    MW: 38497.1 Da    PI: 6.6008
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON48704.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.41.7e-10171216454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  h ++Er+RR+ + ++f  L  ++P +     kK++Ka++L  A+++Ik+L
  PON48704.1 171 DHVIAERKRRETLSQRFIALSAVVPGL-----KKMDKASVLGDAIKHIKNL 216
                 6999***********************.....9****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MEDPTNLFHQ YQVDYSLDDL NFQSFSSESY SSYNPNFVPE NAQNLSSNNT ALEPPQTEFE  60
RPAKQLKTNS WNSCTTNNNN QMSAKGSLSA SSSQLISFEK YASSAAATPD NKHYNNLEGS  120
VIMKPKDEPG MNGCNMVFQS SCEAQICSPN YGQGVKRAVG SMSRSPLHAQ DHVIAERKRR  180
ETLSQRFIAL SAVVPGLKKM DKASVLGDAI KHIKNLKEQL NTLEEQAAKK TVESVVFVKR  240
SQLSGDDETS SDDENFDSNS DQPLSEIEAR VSGKDVLIRI HCEKHKGCLT NVLNQIEKLH  300
LTIVSSSILP FGGSTNHITI VAQMDVEYSM KVKDLVRNLR QALLKIN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1176181ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.11e-58bHLH family protein