PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON48791.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

TCP

Protein Properties

Length: 553aa MW: 57282.8 Da PI: 8.1573

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON48791.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	132.4	4.3e-41	154	261	2	115
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaakskk 99 a+ k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++ + s +ss+s+ s++ +sk+ PON48791.1 154 APVKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFStLNISLRSSGSTLSAP-------PSKS 245 7789*****************************************************************9997777777777744444.......2333 PP TCP 100 sqksaasalnlakesr 115 +++s + al+la++++ PON48791.1 246 APHSFHGALALAAHHH 261 3333333333333322 PP

Sequence ? help Back to Top
Protein Sequence Length: 553 aa Download sequence
MDLADLQSNN KQNNNNKKLH QQQQKQSSSS ATQFVVPFDG RSSNPFMGSI SIQAGLTTTT 60 STPHGHGSTA TPAGGVAAPA GSSSSSSSSS SNSSSSTSAS TAPPHLVDAS LAIATRSESH 120 PSNRPATLVV DSSAKKNQQQ QQQLSIASTT AAAAPVKRST KDRHTKVDGR GRRIRMPATC 180 AARVFQLTRE LGHKSDGETI EWLLQQAEPA IIAATGTGTI PANFSTLNIS LRSSGSTLSA 240 PPSKSAPHSF HGALALAAHH HPHYDEGFAH ASLMGFHHHH LHHQQQQPPP LMTADQIAEA 300 LPSGGDSGGG GDSTENYMRK RFREDLFKEN SETQTDQGGG GGSPSNNNKS FKSGGGGGGG 360 GGLQLPKQQQ DAAGSSGLLR PSNMLPATAM WAVAPAPTSG AGSTFWMLPV SAGAGVPPVA 420 ATTSGAGPSE HQMWTFPTTP ASHGNTLQAP LHFMPRFNLP GNLEFQGGRG STSPLQLGSM 480 LMQQQPSQHL GLGVSESNLG MLAALNAYSR AGGGGGGGLN MNSDHQQSHP LEHHHQHQPQ 540 ATDSGDEDPN NSQ

Sequence ? help Back to Top

Protein Sequence Length: 553 aa Download sequence

MDLADLQSNN KQNNNNKKLH QQQQKQSSSS ATQFVVPFDG RSSNPFMGSI SIQAGLTTTT  60
STPHGHGSTA TPAGGVAAPA GSSSSSSSSS SNSSSSTSAS TAPPHLVDAS LAIATRSESH  120
PSNRPATLVV DSSAKKNQQQ QQQLSIASTT AAAAPVKRST KDRHTKVDGR GRRIRMPATC  180
AARVFQLTRE LGHKSDGETI EWLLQQAEPA IIAATGTGTI PANFSTLNIS LRSSGSTLSA  240
PPSKSAPHSF HGALALAAHH HPHYDEGFAH ASLMGFHHHH LHHQQQQPPP LMTADQIAEA  300
LPSGGDSGGG GDSTENYMRK RFREDLFKEN SETQTDQGGG GGSPSNNNKS FKSGGGGGGG  360
GGLQLPKQQQ DAAGSSGLLR PSNMLPATAM WAVAPAPTSG AGSTFWMLPV SAGAGVPPVA  420
ATTSGAGPSE HQMWTFPTTP ASHGNTLQAP LHFMPRFNLP GNLEFQGGRG STSPLQLGSM  480
LMQQQPSQHL GLGVSESNLG MLAALNAYSR AGGGGGGGLN MNSDHQQSHP LEHHHQHQPQ  540
ATDSGDEDPN NSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	5e-75	TCP family protein