PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON48988.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 368aa MW: 40678.5 Da PI: 9.3754

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON48988.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.3	3.1e-53	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLk+k+++ +l++ ++i+e+d+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l++ +++ PON48988.1 15 LPPGFRFHPTDEELVVHYLKRKAASVPLPV-TIIAEIDLYKFDPWELPSKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTSnGSH 112 79**************************.89***********988899**********************************9986788 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kk Lvfy g+ pkg kt+W+mheyrl PON48988.1 113 KVGVKKALVFYGGKPPKGIKTNWIMHEYRL 142 9*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MESTDSSSES QHPQLPPGFR FHPTDEELVV HYLKRKAASV PLPVTIIAEI DLYKFDPWEL 60 PSKASFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPILTSNG SHKVGVKKAL 120 VFYGGKPPKG IKTNWIMHEY RLVEATNNST TTTTTASKLM NHPQDTNKKA SLRLDDWVLC 180 RIYKKNNAQR PMILERDDKD EPMLMPMIPK PPGPGPGPTA LHENEESFLQ RLLSGEGMQS 240 GSTTNNINNI NNNSESFETR KRTDQIIDVM KRPQASSFWN EAGPMMSPGG GKRFHGDLNS 300 TSSTSTSTNN TAGGGGGGTG STAEIYNSSF VSILNQTASF HHQNALLGSV SDGVLRPQFQ 360 LPSMNWNS

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MESTDSSSES QHPQLPPGFR FHPTDEELVV HYLKRKAASV PLPVTIIAEI DLYKFDPWEL  60
PSKASFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPILTSNG SHKVGVKKAL  120
VFYGGKPPKG IKTNWIMHEY RLVEATNNST TTTTTASKLM NHPQDTNKKA SLRLDDWVLC  180
RIYKKNNAQR PMILERDDKD EPMLMPMIPK PPGPGPGPTA LHENEESFLQ RLLSGEGMQS  240
GSTTNNINNI NNNSESFETR KRTDQIIDVM KRPQASSFWN EAGPMMSPGG GKRFHGDLNS  300
TSSTSTSTNN TAGGGGGGTG STAEIYNSSF VSILNQTASF HHQNALLGSV SDGVLRPQFQ  360
LPSMNWNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	1e-102	NAC family protein