PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON49316.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB
Protein Properties Length: 308aa    MW: 34814.6 Da    PI: 4.887
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON49316.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.52e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEd++lv ++k++G  +W+  ++  g+ R++k+c++rw +yl
       PON49316.1 14 KGVWSPEEDQKLVAYIKRYGIWNWSEMSKAAGLARSGKSCRLRWMNYL 61
                     799*****************99************************97 PP
2Myb_DNA-binding50.74.2e-1668111247
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      g++++eE e ++ +++ lG++ W++Ia++++ gRt++++k++w++ 
       PON49316.1  68 GNFSKEERETIIALHETLGNR-WSAIAAKLP-GRTDNEVKNYWHTN 111
                      89*******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MGKTWRCQKT HLNKGVWSPE EDQKLVAYIK RYGIWNWSEM SKAAGLARSG KSCRLRWMNY  60
LRPDIKHGNF SKEERETIIA LHETLGNRWS AIAAKLPGRT DNEVKNYWHT NLKKVPKQLR  120
RANSSATCTT SASNSTFSAT ELEAAKPPNS NDDELASPDI DNNLSESITE ISFPHEPSES  180
SKLEGSSNIH LVPLHDELVS TQDFSLLAPV NCETGETQNV NQTILNNASE TFEDIIQTQP  240
VENGGLCTPE DAQAMFIDHP NYGQLIGPSS STTSEAMYSQ QEPIWPYDHF YELEYLCNDW  300
LNHMDTIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.16e-52MYB family protein