PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON49338.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 393aa MW: 44039.9 Da PI: 6.7841

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON49338.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.8	2.9e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lvd+++++G g+W+t ++ g+ R++k+c++rw +yl PON49338.1 14 KGPWTPEEDQKLVDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	54.3	3.1e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ PON49338.1 67 RGRFSFEEEETIIQLHSILGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MGRAPCCDKN GLKKGPWTPE EDQKLVDYIQ KHGYGNWRTL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHSPRL DLLDLSSILS SSLYNASQHH HHQMNNMTRF LGVQPVVNPE LLRLATSLMS 180 SSSSSQRRSN QNSNFYLPSS HEVDQNQLCG AIHNNNPQLQ QVLLQPNQLH NEISAAPGCP 240 TLDNMPCVPL SNEGHDLSNL TNFSSPSSQI SEWQSSTTAT TATTSAMLSN FNEDYVPSLP 300 SYGAYGNYGH DDHHYQTTTV VGPSTESFQS NNCNPNFGFT TSVLSTPSSS PTTVLNSNST 360 TYLTSSTEDE RESYCSSMLK FEISDILDVN EFM

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MGRAPCCDKN GLKKGPWTPE EDQKLVDYIQ KHGYGNWRTL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHSPRL DLLDLSSILS SSLYNASQHH HHQMNNMTRF LGVQPVVNPE LLRLATSLMS  180
SSSSSQRRSN QNSNFYLPSS HEVDQNQLCG AIHNNNPQLQ QVLLQPNQLH NEISAAPGCP  240
TLDNMPCVPL SNEGHDLSNL TNFSSPSSQI SEWQSSTTAT TATTSAMLSN FNEDYVPSLP  300
SYGAYGNYGH DDHHYQTTTV VGPSTESFQS NNCNPNFGFT TSVLSTPSSS PTTVLNSNST  360
TYLTSSTEDE RESYCSSMLK FEISDILDVN EFM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-100	MYB family protein