PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON49447.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family B3
Protein Properties Length: 505aa    MW: 56734 Da    PI: 6.8502
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON49447.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B399.42.2e-31169275199
                 EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefe 91 
                 f+kv tpsdv+k++rlv+pk++ae++      ++++ ++  l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g+  + +
  PON49447.1 169 FDKVVTPSDVGKLNRLVIPKQHAERYfpldssNSENSKGLLLNFEDRNGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFERGvGEsGKSR 267
                 89****************************98555668889************************************************6657778888 PP

                 .EEEEE-S CS
          B3  92 lvvkvfrk 99 
                 l++ ++r+
  PON49447.1 268 LFIDWRRR 275
                 99999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 505 aa     Download sequence    
MEFVQEDQDK DHHHQQQSSY YSDYKQEEEL DVYKVRENNN KNIVDNNTAT KSTQLPLSFC  60
ASSSGHNSEQ SSINSTSCVV HHHQQPKWSS AAPSSSVLPA DYHNHQSINF NKKLQLMADF  120
SLSRTNYEEN NNSNIIDDNS NNGTTSSTSP STAGHGVWSC GASEREHMFD KVVTPSDVGK  180
LNRLVIPKQH AERYFPLDSS NSENSKGLLL NFEDRNGKAW RFRYSYWNSS QSYVMTKGWS  240
RFVKEKKLDA GDIVSFERGV GESGKSRLFI DWRRRPHNHQ NHHLHHHLHP HTLLPPNPGS  300
LITPLVHFPT DHHHQFQWGG GGGGGGGGGS GRRGEGLFYS LPSGISMSIP PQHHDNSMYN  360
FNNMQYPHNH HHPHQYQHLQ QYYHGTGIRG GNDHDNVPVV IESTPAAIIG GRAPPSASSK  420
RLRLFGVNME YCPEQEGGEE EEESIADATI ASVLSNSSNS VHQYPPHDHD HQVRLPNPSQ  480
MPITIPPEFI SQKGKSSLSF DLEPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.11e-62B3 family protein