PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON49460.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

C2H2

Protein Properties

Length: 196aa MW: 21382.5 Da PI: 9.5065

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON49460.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.7	0.0017	58	80	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H PON49460.1 58 FECKTCNRQFPSFQALGGHRASH 80 89**********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MKRSITEREL EKLTMANCLM FLSRGGSITT SDHHHHHQFE YSNSSSNLSP SSSPSRVFEC 60 KTCNRQFPSF QALGGHRASH KKPRLMTGEG GNSSDSQSGS PTKPKTHECT ICGLEFAIGQ 120 ALGGHMRRHR AALTENQAPA PVVVPPINIA SLAQVRPVVK KASRVLCLDL NLTPLENDIK 180 FLQLGKSSVP LVDCLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	156	165	RPVVKKASRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	7e-38	C2H2 family protein