PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON49682.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 211aa    MW: 24000.4 Da    PI: 6.8112
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON49682.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.65.2e-091562655
                HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
         HLH  6 nerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                 ++E++RR++++  +++L +llP++    sk  ++  +    A++YIksL+
  PON49682.1 15 RIVEKNRRNQMKVLYSKLNSLLPPQ---ISKEaPTLPDQIDGAIKYIKSLE 62
                689*********************9...66666****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MDQGSQSSVT KIERRIVEKN RRNQMKVLYS KLNSLLPPQI SKEAPTLPDQ IDGAIKYIKS  60
LETKVKKSKD KKKSLLGGTK KRSYSSTFSD NMIMATGSLR SPKIEIHEMG SVLEIVLITG  120
QDNQFIFYEV IRMLHEERAD VVDAKFSVLG DSIFHVVHAE IADSMFAFGA TKISERLKRF  180
VSGSSSDAEL QADDDQHWWD DFEIHPEMLE F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.12e-28bHLH family protein