PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON49736.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MIKC_MADS
Protein Properties Length: 243aa    MW: 27391.6 Da    PI: 9.6316
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON49736.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF849.4e-27959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                k+i+n + rqvtfskRr g+ KKA+ELS+LCdae+a+iifs tgkl+e+ss
  PON49736.1  9 KKIDNVTARQVTFSKRRRGLVKKAQELSILCDAEIALIIFSATGKLFEFSS 59
                68***********************************************96 PP
2K-box393.5e-14911731799
       K-box  17 lqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                  ++++ +L ke+ n   ++R+++G dL  ++l eL +Le++Le +l+++ ++K++ ++++i  l +k  e+ +en++L++kl+
  PON49736.1  91 NNTNHMRLSKEVANKSLQLRQMMGVDLRGIKLDELLHLEKKLEAGLTRVLETKEKRFRTEIAALERKGAETIKENQQLKQKLM 173
                 4556778999999888899**************************************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MAREKIKIKK IDNVTARQVT FSKRRRGLVK KAQELSILCD AEIALIIFSA TGKLFEFSSS  60
SMKDLLARCE AQHNNHEKSD QLPSLELQLE NNTNHMRLSK EVANKSLQLR QMMGVDLRGI  120
KLDELLHLEK KLEAGLTRVL ETKEKRFRTE IAALERKGAE TIKENQQLKQ KLMMKLYSKG  180
KQHVVMGYSD KYAIDINNTV MEERMSSNDQ SAATNVCSCN SSNASLADDN SDTSLKLGLP  240
CSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.18e-64MIKC_MADS family protein