PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON50096.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WRKY

Protein Properties

Length: 407aa MW: 44786.9 Da PI: 5.371

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON50096.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	92.4	3.5e-29	143	204	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK++ g+++pr+YYrCt++ gC ++k+v+rs+ed +++eitY+g+H+++ PON50096.1 143 LDDGFSWRKYGQKDILGAKYPRGYYRCTHRnvqGCLATKQVQRSDEDSTIFEITYRGRHTCT 204 59*************************98999************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MDQNMGDWEQ KNLVNELTRG KELARQLQIH LNAANTAASA SSSSSSHETR EYLVQNILRS 60 YEKALSMLNW TSLPAGDHPL QPSPGAPVRM SESPPSLTGS PRSEDSDRDQ DNKDNIGSRK 120 RKSLPRWTQQ VRVDPGMGLE GPLDDGFSWR KYGQKDILGA KYPRGYYRCT HRNVQGCLAT 180 KQVQRSDEDS TIFEITYRGR HTCTQASHVL GTASSGQNQE LPTSNNSIIN ISNTIESHHP 240 HPPNNLLQPL EQTQQQTQDH MLSDFKSGLK VITEGLDNLD GQSSLISSSF NLFASTSNLN 300 IPKAEENPRQ YFEPNSMIND GFVGGFSPSF VSPAASGTNY FSASQGGSHE FGVDHHQNFD 360 QQGSESEIAE IISAVTSATG TPTIGPDFQF GHGEFDSNFT FDNSGLF

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MDQNMGDWEQ KNLVNELTRG KELARQLQIH LNAANTAASA SSSSSSHETR EYLVQNILRS  60
YEKALSMLNW TSLPAGDHPL QPSPGAPVRM SESPPSLTGS PRSEDSDRDQ DNKDNIGSRK  120
RKSLPRWTQQ VRVDPGMGLE GPLDDGFSWR KYGQKDILGA KYPRGYYRCT HRNVQGCLAT  180
KQVQRSDEDS TIFEITYRGR HTCTQASHVL GTASSGQNQE LPTSNNSIIN ISNTIESHHP  240
HPPNNLLQPL EQTQQQTQDH MLSDFKSGLK VITEGLDNLD GQSSLISSSF NLFASTSNLN  300
IPKAEENPRQ YFEPNSMIND GFVGGFSPSF VSPAASGTNY FSASQGGSHE FGVDHHQNFD  360
QQGSESEIAE IISAVTSATG TPTIGPDFQF GHGEFDSNFT FDNSGLF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	118	123	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.1	1e-63	WRKY family protein