PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON50142.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 203aa    MW: 23131.8 Da    PI: 8.4753
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON50142.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.97.5e-134184755
                HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 +ErrRR+++N+++  Lr l+P+      + + Ka+i+  Av YIk+Lq
  PON50142.1 41 HAERRRREKLNDRLLALRGLVPNI-----TNMKKATIVDDAVTYIKQLQ 84
                79*********************6.....5799***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MDQFITSSGL EELCIREKGR TGRKRPEKDQ NGSSFKSKNL HAERRRREKL NDRLLALRGL  60
VPNITNMKKA TIVDDAVTYI KQLQKTVDNL QDQLLGIEAS SAEGTELKKE EITAEDKEEH  120
RIQPDITVTQ LHENKLWIKV IFKKKLGGFT KLMEVLSALG FELTDTCLTT YNGLMLVTVC  180
LQGFSRELLA VEEIKEVLLK MVN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14348ERRRRE
24449RRRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.12e-42bHLH family protein