PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON50432.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family HRT-like
Protein Properties Length: 341aa    MW: 38070.1 Da    PI: 9.9619
Description HRT-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON50432.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HRT-like32.11.9e-10273294122
    HRT-like   1 iCGviledGsvCkrqPvkgRKR 22 
                 iCGvil++ svC+r+Pv+gRKR
  PON50432.1 273 ICGVILSHDSVCRRPPVEGRKR 294
                 8********************9 PP
2HRT-like24.54.7e-08321341121
    HRT-like   1 iCGviledGsvCkrqPvkgRK 21 
                 +CG+i  dGs+C+ +P++g+K
  PON50432.1 321 TCGFISPDGSPCRSPPIQGNK 341
                 7******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MVAGDPGVVV SRLKREDCQR TKHDSHFSKW EILVGPSDWE DYSLGKEGAE RYRVHNLPRD  60
SGPGVYELGI AVSRTGLGRD IGKLDPERLV VVYLGQAECV RTRLQRYGRS GAHLGSSYPT  120
GFPADWKTAL QKGPGLFEKI LLSGYPIVFR WAPMQSKSDA IRTETQLLNT FDYAWNTSIN  180
GSRRPDDILQ KLKKISSSTT HFSDIGRKLV PFRHKQVGIR IEARKLPSAE NKFSTSKDDE  240
ESHNFLPRVF KFGRSQPRLV LDRNTIMEEK TTICGVILSH DSVCRRPPVE GRKRSPSSSH  300
DSKGLSPVTV NDSISESFTA TCGFISPDGS PCRSPPIQGN K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56780.13e-84HRT-like family protein