PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON50457.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GATA
Protein Properties Length: 324aa    MW: 36113.7 Da    PI: 9.644
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON50457.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.22.6e-19183216134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C+ C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  PON50457.1 183 CADCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 216
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MDPPNNHNYS STPSSFLELK EDQTSSFLSL SCPAFMNPTQ DQGHFYYSEP QHIQLFPQEV  60
DKTNIVSSGG SCDHRPRAEE SHEFVDHDLK LSIWKSSEDH SSTNDVKINN IHGDENINSV  120
KWTSSKMRMM RKMIVNPDQP ATNNTPIDFT TQKFEVAKNK HPGSPNDHST SSSSNNNTTI  180
RVCADCNTTK TPLWRSGPRG PKSLCNACGI RQRKARRAMA LAAAAANGTI LAVDAPSMKN  240
TTTKVEIKEK KSRSIGGTNN CCLPFKKRCK LTRPPSSRGR RKNKLCFEDL IKVSKNSAFQ  300
RVFPQDERDA AILLMALSYG LVHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.16e-32GATA family protein