PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON50502.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 358aa    MW: 39290.8 Da    PI: 6.3364
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON50502.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.57.7e-194391355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                + GVr+++ +gr++AeIrdps+   + r++lg+f+taeeAa a+++a+++++g
  PON50502.1 43 FLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAEEAALAYDRAARSMRG 91
                67******.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MNGSPVGASN INNIKSINKK MMKKQGAGAG HSPQAAEREG ARFLGVRRRP WGRYAAEIRD  60
PSTKERHWLG TFDTAEEAAL AYDRAARSMR GSRARTNFVY SDMPAGSALT SILSPEDPSI  120
NGSNVNVNVN VNFSAALQHQ HRHQHQQMNI PHAAAPTDHD HDHDQPQPAH PLLMAADKQL  180
DLINHHHHDQ YYDYFSSSTT STAAPLLLDD TSSLYSCPGH QYNYNSLMNN YEQQQEKQAM  240
MIINTSSSST GSNYNTSNNI NSNYFSSSSS SAELPPFPDS DITSYKNDHH HADEQSSTTT  300
AGGASYFGMG MELDYYSNSG AYAVHSPLFS TMPSVSDALP SLDAFDLAPS NTPSSFFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.16e-27ERF family protein