PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON50541.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 966aa MW: 107141 Da PI: 5.0323

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON50541.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.7	2.6e-18	38	83	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+WT+eEdell +av+ + g++Wk+Ia+++ Rt+ qc +rwqk+l PON50541.1 38 GKWTAEEDELLRRAVEHYKGKNWKKIAECFK-DRTDVQCLHRWQKVL 83 89**************************9.**********986 PP
2	Myb_DNA-binding	56.9	4.7e-18	89	135	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde +v++v+++G + W+ Ia+ ++ gR +kqc++rw+++l PON50541.1 89 KGPWSKEEDEVIVELVNEYGAKKWSMIAEALP-GRIGKQCRERWHNHL 135 79****************************.***********97 PP
3	Myb_DNA-binding	49	1.4e-15	141	183	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE++ l++a++ +G++ W+ + ++ gRt++ +k++w+ PON50541.1 141 KEPWTQEEELALIRAHQIYGNK-WAELTKFLP-GRTDNAIKNHWN 183 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 966 aa Download sequence
MTRLRRTSVK IDGVSNALQK LKPSRGRTSG PTRRSTTGKW TAEEDELLRR AVEHYKGKNW 60 KKIAECFKDR TDVQCLHRWQ KVLNPELIKG PWSKEEDEVI VELVNEYGAK KWSMIAEALP 120 GRIGKQCRER WHNHLNPAIN KEPWTQEEEL ALIRAHQIYG NKWAELTKFL PGRTDNAIKN 180 HWNSSVKKKL ETYLASGLLD QLETYLPQVG NLNSASSLGI QPNNVSGVAE EDSSECSQGS 240 NGVNCAQFEP ITENAASSAE EKFKTEESGC SMGHDLEQFG NATPGINNSH FGSHDLAMSC 300 LGAPEESSLQ LGTSGLNITS NENRTGSTLL QSTVGFSIDT VENLLVDSVK LERLLISKND 360 CSESTFSESR GPGCFPQENA EERSNSLGLD GVGNSSLCHC DIESSLTART SPLESFVHGK 420 YISQQTLELE VNPSLRDNFI CVDSPTGEAD KTDSYPKLDD AKNAPKLVAV DIFSKRNSDS 480 TGTFVSAHEN KTHSKADSLQ TIPSIDDDAT MQKEEQDLQT RSYEPPRFPR LDIPFFNYDL 540 MESAGDLQHN YSPFGIRQLM IPSASLSSPH CLLVDSPTWD STPRAVLKHA SKSINSSTTM 600 IKRRLHEILS PVKERRGETN LDRESNIRSS SFSCAFSSLE SLFDDNGACR MSISSIDDSM 660 LDVTGVDYAF EEGTKRVDKL DSKISEKDES TSNSSDKLEQ ELKIDNSDTN FKQQSARVLI 720 EHNLDGQLIV SPRFGHQANR RLAAAVLSPR SRYSRRWDRS DQGGSLDSVI GKDERCKVPV 780 MSVEFATPSK PLEETASRAA GNDADIQGTY MIGETPGTQR DLESPSAWKL LHSFLHGPGV 840 DADIPLQELE YFLSPGMRSY EAFGLMRQMN PGEVPASDPD YPEMSSKTLI SSDDQNLFLK 900 DDYFLHDEKE NFPSPNVLLM DRRVLDFGGC GTETPVKEME NKNFAGNSSS EGTSGPSSSH 960 LMKSCR

Sequence ? help Back to Top

Protein Sequence Length: 966 aa Download sequence

MTRLRRTSVK IDGVSNALQK LKPSRGRTSG PTRRSTTGKW TAEEDELLRR AVEHYKGKNW  60
KKIAECFKDR TDVQCLHRWQ KVLNPELIKG PWSKEEDEVI VELVNEYGAK KWSMIAEALP  120
GRIGKQCRER WHNHLNPAIN KEPWTQEEEL ALIRAHQIYG NKWAELTKFL PGRTDNAIKN  180
HWNSSVKKKL ETYLASGLLD QLETYLPQVG NLNSASSLGI QPNNVSGVAE EDSSECSQGS  240
NGVNCAQFEP ITENAASSAE EKFKTEESGC SMGHDLEQFG NATPGINNSH FGSHDLAMSC  300
LGAPEESSLQ LGTSGLNITS NENRTGSTLL QSTVGFSIDT VENLLVDSVK LERLLISKND  360
CSESTFSESR GPGCFPQENA EERSNSLGLD GVGNSSLCHC DIESSLTART SPLESFVHGK  420
YISQQTLELE VNPSLRDNFI CVDSPTGEAD KTDSYPKLDD AKNAPKLVAV DIFSKRNSDS  480
TGTFVSAHEN KTHSKADSLQ TIPSIDDDAT MQKEEQDLQT RSYEPPRFPR LDIPFFNYDL  540
MESAGDLQHN YSPFGIRQLM IPSASLSSPH CLLVDSPTWD STPRAVLKHA SKSINSSTTM  600
IKRRLHEILS PVKERRGETN LDRESNIRSS SFSCAFSSLE SLFDDNGACR MSISSIDDSM  660
LDVTGVDYAF EEGTKRVDKL DSKISEKDES TSNSSDKLEQ ELKIDNSDTN FKQQSARVLI  720
EHNLDGQLIV SPRFGHQANR RLAAAVLSPR SRYSRRWDRS DQGGSLDSVI GKDERCKVPV  780
MSVEFATPSK PLEETASRAA GNDADIQGTY MIGETPGTQR DLESPSAWKL LHSFLHGPGV  840
DADIPLQELE YFLSPGMRSY EAFGLMRQMN PGEVPASDPD YPEMSSKTLI SSDDQNLFLK  900
DDYFLHDEKE NFPSPNVLLM DRRVLDFGGC GTETPVKEME NKNFAGNSSS EGTSGPSSSH  960
LMKSCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11510.2	1e-93	MYB family protein