PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON50804.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 242aa    MW: 26713.7 Da    PI: 6.7414
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON50804.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.30.000311922281354
                 HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH  13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                 R+r+++    Lr ++P  +       ++ +++L +Av+Y+ksL
  PON50804.1 192 RQRMKKMVKALRGIVPGgN------EMTTVTVLDEAVQYLKSL 228
                 6888889999******955......8***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MQHNHQFYPG KKAPPLEYQV GNNHMHVPVA SAFGAVLPPP GNHLKHFHGV EFQPSEVCPK  60
NFIIFDQTDH RSQIVFHPAI AHKFGSPGLN MDGAYLRSYF GGRDRNDEGG EISSPLKEDS  120
DDIDALLSLE EEEQDEYDEE EISTARTYGN YGSSSPESCS NYGLKTKKNT SSSSIQKSSG  180
SGSSGCNSER KRQRMKKMVK ALRGIVPGGN EMTTVTVLDE AVQYLKSLKV EVQKLGVGNQ  240
KH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29950.16e-44bHLH family protein