PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON50858.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family LBD
Protein Properties Length: 119aa    MW: 13694.3 Da    PI: 5.4314
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON50858.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260348.5e-11136054101
      DUF260  54 redamsslvyeAearardPvyGavgvilklqqqleqlkaelallkeel 101
                  ++a++s+ +eA++ ++dPvyG v++i++l++q++++++ela++++++
  PON50858.1  13 PSQAADSVHFEAQCIMEDPVYGRVKIINELHRQIHNAETELAKTRTQI 60 
                 56899**************************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    
MISGRCAACM STPSQAADSV HFEAQCIMED PVYGRVKIIN ELHRQIHNAE TELAKTRTQI  60
AFMISYTNIT QQTHHDQLHD DVEFNFNLDS YFLQEKSTNI TDRSSHCPST QPVPWFVYD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26660.18e-12LBD family protein