PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON50894.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

YABBY

Protein Properties

Length: 139aa MW: 15486.2 Da PI: 9.8633

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON50894.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	140	2.7e-43	25	108	86	170
YABBY 86 vekeesastsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 v ++ s+s+ ++++ e+ d+e p+ pp irPPekrqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl PON50894.1 25 VNESGSSSKCNNKNAAFESVDHEQPKSPP-IRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 108 33334444444444446778899999888.9****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 139 aa Download sequence
MGATLQTVAP QDPQKQIPVS SEDSVNESGS SSKCNNKNAA FESVDHEQPK SPPIRPPEKR 60 QRVPSAYNRF IKEEIQRIKA SNPDISHREA FSTAAKNWAH FPHIHFGLKL DGTNNKQAKL 120 DKTIAGDHHQ GTQKTNGFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	1e-50	YABBY family protein