PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON51364.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Trihelix

Protein Properties

Length: 400aa MW: 44096.3 Da PI: 8.8553

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON51364.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	48.9	1.7e-15	23	114	2	73
trihelix 2 WtkqevlaLiearremeerlrrg.k...................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrts 73 Wt +e++ Liea++ ++er ++ ++ +W++v ++++++g+ rs++qC++kw+nl ++ykk+++ e++ ++ PON51364.1 23 WTVSETMILIEAKKMDDERRMKRiTandneqgrsisgttttstkPAELRWKWVEDYCWRKGCLRSQNQCNDKWDNLMRDYKKVRDYERRVAE 114 ***********9666665543212344566666677777766999**************************************98643 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MADQGGNTSS NTTLMRDYRK GNWTVSETMI LIEAKKMDDE RRMKRITAND NEQGRSISGT 60 TTTSTKPAEL RWKWVEDYCW RKGCLRSQNQ CNDKWDNLMR DYKKVRDYER RVAEKSGAGG 120 EGVSTHEDQS YWEIEKNERK EKNLPTNMLP QIYEALVDVV ERKSQRLSGG ISGVSSVPSS 180 SPSIGYQMVE RPISGGGVIH HPHHHLQQPP LMASQPLLQP HHISASPITA LPLPPASAPV 240 TVAAAELAVA PPPVQAQPPP HALPILPTVD SDTSEHPNSP AKRRKKASDH QQQQHHQGPG 300 TAPTTSASGR SSSSSSDQVV ATAISKSASI IAEALQACEE REERRHRDLL SLHEKRLKIE 360 ESKTEVNRQG INGLVDAINK LANSIQALAS DRHQSTSKPS

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MADQGGNTSS NTTLMRDYRK GNWTVSETMI LIEAKKMDDE RRMKRITAND NEQGRSISGT  60
TTTSTKPAEL RWKWVEDYCW RKGCLRSQNQ CNDKWDNLMR DYKKVRDYER RVAEKSGAGG  120
EGVSTHEDQS YWEIEKNERK EKNLPTNMLP QIYEALVDVV ERKSQRLSGG ISGVSSVPSS  180
SPSIGYQMVE RPISGGGVIH HPHHHLQQPP LMASQPLLQP HHISASPITA LPLPPASAPV  240
TVAAAELAVA PPPVQAQPPP HALPILPTVD SDTSEHPNSP AKRRKKASDH QQQQHHQGPG  300
TAPTTSASGR SSSSSSDQVV ATAISKSASI IAEALQACEE REERRHRDLL SLHEKRLKIE  360
ESKTEVNRQG INGLVDAINK LANSIQALAS DRHQSTSKPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31310.1	1e-58	Trihelix family protein