PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON51411.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 537aa MW: 58966.8 Da PI: 6.3513

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON51411.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.3	4.3e-16	329	375	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq PON51411.1 329 VHNLSERRRRDRINEKMKALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 375 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 537 aa Download sequence
MNHCVPDFEM EDEYSIPTSS GLARPKKSYL PEEDIMELLW QNGQVIAQSQ NQRSVMRKSS 60 PPSSKYDAVI PADMEISSSQ GQVHDHHXLF MQEDEMASWL HYPLVDYPSL EHNFSADLLY 120 PPPSETTTTT TNSTPALRHT HFSEVRPPVT MADMPVQASS RPPVPPPART EVQNFVHFSR 180 HNNNSSSKAR DESGPSCSKS AVRELSTTVV DSCDTPAVGP NSRVSEIGRR SSPGETSYGN 240 LRSGYISGGG GKEAVRCEGT MTSSPGDSSA SAEPPLATKS TAAGEDRKRK VVEADDTECQ 300 SEDAEFESGD VKKQARGTAS TKRSRAAEVH NLSERRRRDR INEKMKALQE LIPRCNKSDK 360 ASMLDEAIEY LKSLQLQVQM MSMGCGMVPM MFPGIQQYMP PMGMGIGMGM GMGMEMGMNR 420 PIMPFPNVLT GSAITAPATA AHLGPRFPMP AFHMPPVPKT EASRAQATNQ PDYMFQSFAT 480 QNPNQSRIPN FSDPYQQYLG SHQMQLPLQQ NQAMVQPSTS KPSTSRGPEN PENHQSG

Sequence ? help Back to Top

Protein Sequence Length: 537 aa Download sequence

MNHCVPDFEM EDEYSIPTSS GLARPKKSYL PEEDIMELLW QNGQVIAQSQ NQRSVMRKSS  60
PPSSKYDAVI PADMEISSSQ GQVHDHHXLF MQEDEMASWL HYPLVDYPSL EHNFSADLLY  120
PPPSETTTTT TNSTPALRHT HFSEVRPPVT MADMPVQASS RPPVPPPART EVQNFVHFSR  180
HNNNSSSKAR DESGPSCSKS AVRELSTTVV DSCDTPAVGP NSRVSEIGRR SSPGETSYGN  240
LRSGYISGGG GKEAVRCEGT MTSSPGDSSA SAEPPLATKS TAAGEDRKRK VVEADDTECQ  300
SEDAEFESGD VKKQARGTAS TKRSRAAEVH NLSERRRRDR INEKMKALQE LIPRCNKSDK  360
ASMLDEAIEY LKSLQLQVQM MSMGCGMVPM MFPGIQQYMP PMGMGIGMGM GMGMEMGMNR  420
PIMPFPNVLT GSAITAPATA AHLGPRFPMP AFHMPPVPKT EASRAQATNQ PDYMFQSFAT  480
QNPNQSRIPN FSDPYQQYLG SHQMQLPLQQ NQAMVQPSTS KPSTSRGPEN PENHQSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	334	339	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.2	2e-76	bHLH family protein