PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON51481.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 475aa MW: 51710.6 Da PI: 7.2897

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON51481.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.7	1.3e-18	38	85	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed++l ++vk++G g+W+++ ++ g++R++k+c++rw ++l PON51481.1 38 KGPWTAAEDQILMEYVKKHGEGNWNSVQKYSGLNRCGKSCRLRWANHL 85 79******************************************9986 PP
2	Myb_DNA-binding	51.8	1.8e-16	91	134	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE+ l++++++++G++ W++ a+ ++ gRt++++k++w++ PON51481.1 91 KGSFTPEEERLILELHAKYGNK-WARMAAQLP-GRTDNEIKNYWNT 134 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MTPHSNGGGA QNEGGPSGSS GGRGIGGGIG PDGVVLKKGP WTAAEDQILM EYVKKHGEGN 60 WNSVQKYSGL NRCGKSCRLR WANHLRPNLK KGSFTPEEER LILELHAKYG NKWARMAAQL 120 PGRTDNEIKN YWNTRVKRRK RQGLPLYPND IQQFSSQPTT PTSSLTPMTP TPTTPTTTSF 180 LFQNQTQIPF SPTPPPHSPM SSPIQSYPTL ASPSSYEPNS PFTFSSPPYN SFTFQRPVPL 240 LGAPVRFKSF RDSTGFSLPG STSASRTTPQ SSGALLGQYT TPTQLADSAC FQFPLTFDPT 300 LPQNVGTQFD SEHLGSSGSI RSVKSELPSS QFPQIQQPEI ACDNSTKVIS SATTQRNGGL 360 LEDLLENLLE EAQRSVESSS EMVPKEEAKD QINCLPEDIS KLLNFVPATL QVPDWYSDSS 420 EISNGQSLGV TDHNLGLDMH HLASFFPISS AADYGQTPAS WDSLPGICKG WSKHT

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MTPHSNGGGA QNEGGPSGSS GGRGIGGGIG PDGVVLKKGP WTAAEDQILM EYVKKHGEGN  60
WNSVQKYSGL NRCGKSCRLR WANHLRPNLK KGSFTPEEER LILELHAKYG NKWARMAAQL  120
PGRTDNEIKN YWNTRVKRRK RQGLPLYPND IQQFSSQPTT PTSSLTPMTP TPTTPTTTSF  180
LFQNQTQIPF SPTPPPHSPM SSPIQSYPTL ASPSSYEPNS PFTFSSPPYN SFTFQRPVPL  240
LGAPVRFKSF RDSTGFSLPG STSASRTTPQ SSGALLGQYT TPTQLADSAC FQFPLTFDPT  300
LPQNVGTQFD SEHLGSSGSI RSVKSELPSS QFPQIQQPEI ACDNSTKVIS SATTQRNGGL  360
LEDLLENLLE EAQRSVESSS EMVPKEEAKD QINCLPEDIS KLLNFVPATL QVPDWYSDSS  420
EISNGQSLGV TDHNLGLDMH HLASFFPISS AADYGQTPAS WDSLPGICKG WSKHT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	21	28	GGRGIGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.1	2e-68	MYB family protein